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THAPSDRAFT_12024 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7442641, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_12024
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_12024
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_12024 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
2
Sequence:
Chromosome: 23; NC_012086.1 (179157..180150, complement)

Chromosome 23 - NC_012086.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ABC transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012086.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012086.1 Reference assembly

    Range
    179157..180150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002295188.1 → XP_002295224.1  predicted protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002295224.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CG88
    Conserved Domains (1) summary
    cd00084
    Location:108 → 153
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
Nucleotide Protein
Heading Accession and Version

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