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ACT2 actin like protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7442378, updated on 18-Jun-2017

Summary

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Gene symbol
ACT2
Gene description
actin like protein
Locus tag
THAPSDRAFT_41068
Gene type
protein coding
RNA name
actin like protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See ACT2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Sequence:
Chromosome: 6; NC_012069.1 (1135227..1136929)

Chromosome 6 - NC_012069.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012069.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
actin like protein
XP_002291107.1
  • Clearly most similar to arabidopsis homologues, evidence for the presence of a chlorophytic gene in Thaps

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012069.1 Reference assembly

    Range
    1135227..1136929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002291071.1 → XP_002291107.1  actin like protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002291107.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C614
    Conserved Domains (2) summary
    pfam00022
    Location:7 → 458
    Actin; Actin
    cl17037
    Location:6 → 458
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
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Gene LinkOut

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