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P5CS gamma-glutamyl phosphate reductase [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7442351, updated on 21-Dec-2023

Summary

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Gene symbol
P5CS
Gene description
gamma-glutamyl phosphate reductase
Locus tag
THAPSDRAFT_41038
Gene type
protein coding
RNA name
gamma-glutamyl phosphate reductase
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See P5CS in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Sequence:
Chromosome: 6; NC_012069.1 (983360..986073)

Chromosome 6 - NC_012069.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012069.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-5-semialdehyde dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
gamma-glutamyl phosphate reductase
XP_002291080.1
  • Mutual best in genome to Arabidopsis. SP:P54887:P5C1_ARATH; supported by cDNA: gi_1532270_dbj_D32138.1_ATHATP5CS (model%: 99, hit%: 98, score: 1547, %id: 47)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012069.1 Reference assembly

    Range
    983360..986073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002291044.1 → XP_002291080.1  gamma-glutamyl phosphate reductase [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002291080.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C5V7
    Conserved Domains (3) summary
    cd07079
    Location:299 → 707
    ALDH_F18-19_ProA-GPR; Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19
    PLN02418
    Location:2 → 732
    PLN02418; delta-1-pyrroline-5-carboxylate synthase
    cl00452
    Location:9 → 272
    AAK; Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that ...
Nucleotide Protein
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