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THAPSDRAFT_4076 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7442030, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_4076
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_4076
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_4076 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012067.1 (85414..86568)

Chromosome 4 - NC_012067.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene alpha carbonic anhydrase of nostoc-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012067.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012067.1 Reference assembly

    Range
    85414..86568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002289095.1 → XP_002289131.1  predicted protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002289131.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C0V3
    Conserved Domains (1) summary
    cd01390
    Location:56 → 140
    HMGB-UBF_HMG-box; HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone ...
Nucleotide Protein
Heading Accession and Version

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