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THAPSDRAFT_261826 sec14p-like protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7441884, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_261826
Gene description
sec14p-like protein
Locus tag
THAPSDRAFT_261826
Gene type
protein coding
RNA name
sec14p-like protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_261826 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_012066.1 (1171783..1172429, complement)

Chromosome 3 - NC_012066.1Genomic Context describing neighboring genes Neighboring gene branched-chain amino acid aminotransferase Neighboring gene trypsin-like serine protease Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012066.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
sec14p-like protein
XP_002288863.1
  • contains a CRALBP/TRIO domain, present in several lipid-transfer proteins and proteins with diverse functions; phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012066.1 Reference assembly

    Range
    1171783..1172429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002288827.1 → XP_002288863.1  sec14p-like protein, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002288863.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8BY16
    Conserved Domains (2) summary
    smart01100
    Location:1 → 21
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:53 → 216
    CRAL_TRIO; CRAL/TRIO domain
Nucleotide Protein
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