ccnl2.L cyclin L2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ccnl2.L
Official Full Name: cyclin L2 L homeolog
Primary source: Xenbase:XB-GENE-956527
Locus tag: XELAEV_18035648mg
See related: EnsemblRapid:ENSXLAG00005015893 AllianceGenome:Xenbase:XB-GENE-956527
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ccnl2
Summary: Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be located in nuclear speck. Orthologous to human CCNL2 (cyclin L2). [provided by Alliance of Genome Resources, Nov 2024]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 7L

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7L	NC_054383.1 (96626277..96635915)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	7L	NC_030736.1 (86870387..86880187)

Chromosome 7L - NC_054383.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nuclear speck	IEA Inferred from Electronic Annotation more info
located_in nucleoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: cyclin L2 L homeolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096474.1 → NP_001089943.1 cyclin L2 L homeolog

See identical proteins and their annotated locations for NP_001089943.1

Status: PROVISIONAL

Source sequence(s)

BC110781

UniProtKB/TrEMBL

A0A974HCC2, Q2NLA6

Conserved Domains (2) summary

smart00385
Location:178 → 260

CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma

cd00043
Location:55 → 131

CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...