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mphosph10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 733542, updated on 4-Nov-2024

Summary

Official Symbol
mphosph10provided by Xenbase
Official Full Name
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)provided by Xenbase
Primary source
Xenbase:XB-GENE-940335
See related
Ensembl:ENSXETG00000016497 AllianceGenome:Xenbase:XB-GENE-940335
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleolus. Predicted to be part of Mpp10 complex and sno(s)RNA-containing ribonucleoprotein complex. Orthologous to human MPHOSPH10 (M-phase phosphoprotein 10). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See mphosph10 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (97029115..97042254)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (87354185..87367185)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily M member 1 Neighboring gene microRNA mir-204-1 Neighboring gene myotubularin related protein 10 Neighboring gene FANCD2/FANCI-associated nuclease 1 Neighboring gene methylmalonyl-CoA epimerase Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 2

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within rRNA processing IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
part_of sno(s)RNA-containing ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
U3 small nucleolar ribonucleoprotein protein MPP10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199571.1NP_001186500.1  U3 small nucleolar ribonucleoprotein protein MPP10

    Status: VALIDATED

    Source sequence(s)
    AL786715, AL866494, AL877714, CX433715, CX468365, CX470014, CX479576
    UniProtKB/TrEMBL
    F7DW06
    Related
    ENSXETP00000035982.4, ENSXETT00000035982.5
    Conserved Domains (1) summary
    pfam04006
    Location:22670
    Mpp10; Mpp10 protein

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    97029115..97042254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)