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OLR1 oxidized low density lipoprotein receptor 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 717596, updated on 17-Aug-2024

Summary

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Official Symbol
OLR1provided by VGNC
Official Full Name
oxidized low density lipoprotein receptor 1provided by VGNC
Primary source
VGNC:VGNC:75583
Locus tag
EGK_03358
See related
Ensembl:ENSMMUG00000002191
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See OLR1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (9533534..9552047)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (10510785..10529682, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670781 Neighboring gene transmembrane protein 52B Neighboring gene uncharacterized LOC107000757 Neighboring gene C-type lectin domain containing 7A Neighboring gene heterogeneous nuclear ribonucleoprotein A/B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables low-density lipoprotein particle receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell death IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxidized low-density lipoprotein receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194668.1 → NP_001181597.1  oxidized low-density lipoprotein receptor 1

    See identical proteins and their annotated locations for NP_001181597.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000055
    UniProtKB/TrEMBL
    A0A8J8YGS9, F6WMD2, G7N646
    Related
    ENSMMUP00000002921.2, ENSMMUT00000003094.4
    Conserved Domains (2) summary
    cd03593
    Location:144 → 266
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    COG1196
    Location:73 → 137
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    9533534..9552047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015151001.2 → XP_015006487.1  oxidized low-density lipoprotein receptor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YGS9, F6WMD2, G7N646
    Conserved Domains (2) summary
    cd03593
    Location:144 → 266
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    COG1196
    Location:73 → 137
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_015151002.2 → XP_015006488.1  oxidized low-density lipoprotein receptor 1 isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:73 → 137
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl02432
    Location:144 → 188
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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