U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NR1H3 nuclear receptor subfamily 1 group H member 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 713679, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
NR1H3provided by VGNC
Official Full Name
nuclear receptor subfamily 1 group H member 3provided by VGNC
Primary source
VGNC:VGNC:75505
See related
Ensembl:ENSMMUG00000015598
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NR1H3 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (18491546..18511566, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (18757069..18778116, complement)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene myosin binding protein C3 Neighboring gene MAP kinase activating death domain Neighboring gene DNA damage-binding protein 2-like Neighboring gene DNA damage-binding protein 2-like Neighboring gene acid phosphatase 2, lysosomal Neighboring gene protein kinase C and casein kinase substrate in neurons 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Liver x receptor modulation of gene expression leading to proluteolytic effects in primate luteal cells. Bogan RL, et al. Biol Reprod, 2012 Mar. PMID 22156476, Free PMC Article
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
oxysterols receptor LXR-alpha
XP_014969829.1
XP_014969830.1
XP_014969831.1
XP_014969832.1
XP_014969834.1
XP_014969835.1
XP_014969836.1
XP_014969837.1
XP_014969838.1
XP_028689300.1
XP_028689301.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    18491546..18511566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015114352.2 → XP_014969838.1  oxysterols receptor LXR-alpha isoform X4

    UniProtKB/TrEMBL
    F6ST28, G7NDG1
    Related
    ENSMMUP00000037144.2, ENSMMUT00000044138.3
    Conserved Domains (2) summary
    cd06954
    Location:216 → 451
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:84 → 184
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  2. XM_015114346.2 → XP_014969832.1  oxysterols receptor LXR-alpha isoform X1

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:210 → 445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  3. XM_015114345.2 → XP_014969831.1  oxysterols receptor LXR-alpha isoform X1

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:210 → 445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  4. XM_015114348.2 → XP_014969834.1  oxysterols receptor LXR-alpha isoform X1

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:210 → 445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  5. XM_015114343.2 → XP_014969829.1  oxysterols receptor LXR-alpha isoform X1

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:210 → 445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  6. XM_015114349.2 → XP_014969835.1  oxysterols receptor LXR-alpha isoform X2

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:165 → 400
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:33 → 133
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  7. XM_015114350.2 → XP_014969836.1  oxysterols receptor LXR-alpha isoform X2

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:165 → 400
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:33 → 133
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  8. XM_015114344.2 → XP_014969830.1  oxysterols receptor LXR-alpha isoform X1

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:210 → 445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  9. XM_028833468.1 → XP_028689301.1  oxysterols receptor LXR-alpha isoform X2

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:165 → 400
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:33 → 133
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  10. XM_028833467.1 → XP_028689300.1  oxysterols receptor LXR-alpha isoform X1

    UniProtKB/TrEMBL
    G7NDG1
    Conserved Domains (2) summary
    cd06954
    Location:210 → 445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers

  11. XM_015114351.2 → XP_014969837.1  oxysterols receptor LXR-alpha isoform X3

    Conserved Domains (2) summary
    cd07160
    Location:78 → 178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
    cl11397
    Location:210 → 368
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials