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APOF apolipoprotein F [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712761, updated on 17-Aug-2024

Summary

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Official Symbol
APOFprovided by VGNC
Official Full Name
apolipoprotein Fprovided by VGNC
Primary source
VGNC:VGNC:108320
Locus tag
EGK_03804
See related
Ensembl:ENSMMUG00000063898
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See APOF in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (55940238..55941902, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (55144209..55146462, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene poly(A) specific ribonuclease subunit PAN2 Neighboring gene interleukin 23 subunit alpha Neighboring gene U7 small nuclear RNA Neighboring gene signal transducer and activator of transcription 2 Neighboring gene TBCC domain-containing protein 1-like Neighboring gene timeless circadian regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apolipoprotein F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    55940238..55941902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001115088.4 → XP_001115088.1  apolipoprotein F isoform X1

    See identical proteins and their annotated locations for XP_001115088.1

    UniProtKB/TrEMBL
    A0A5F7ZDV5, A0A8J8YD62, F6R1M2
    Related
    ENSMMUP00000062787.1, ENSMMUT00000082587.1
    Conserved Domains (1) summary
    pfam15148
    Location:63 → 260
    Apolipo_F; Apolipoprotein F

  2. XM_015152012.2 → XP_015007498.1  apolipoprotein F isoform X3

    Conserved Domains (1) summary
    pfam15148
    Location:63 → 232
    Apolipo_F; Apolipoprotein F

  3. XM_028829613.1 → XP_028685446.1  apolipoprotein F isoform X2

    Conserved Domains (1) summary
    pfam15148
    Location:52 → 249
    Apolipo_F; Apolipoprotein F
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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