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PNPLA4 patatin like phospholipase domain containing 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708139, updated on 18-Sep-2024

Summary

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Official Symbol
PNPLA4provided by VGNC
Official Full Name
patatin like phospholipase domain containing 4provided by VGNC
Primary source
VGNC:VGNC:81507
See related
Ensembl:ENSMMUG00000018194
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See PNPLA4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (7217619..7462958, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (6711393..6956563, complement)

Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene pseudouridine 5'-phosphatase Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC114674856 Neighboring gene variable charge X-linked-like pseudogene Neighboring gene uncharacterized LOC114674912 Neighboring gene variable charge X-linked-like Neighboring gene microRNA mir-651

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4
NP_001180773.1
XP_014982391.1
XP_014982392.1
XP_028697629.1
XP_028697630.1
XP_028697631.1
XP_028697632.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193844.2 → NP_001180773.1  patatin-like phospholipase domain-containing protein 4

    See identical proteins and their annotated locations for NP_001180773.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02003164
    UniProtKB/TrEMBL
    F7E9K3, G7NS27
    Related
    ENSMMUP00000023933.2, ENSMMUT00000025579.4
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041774.1 Reference Mmul_10 Primary Assembly

    Range
    7217619..7462958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015126905.2 → XP_014982391.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZD64, A0A5F8AQJ5
    Related
    ENSMMUP00000063522.1, ENSMMUT00000080511.1
    Conserved Domains (1) summary
    cd07222
    Location:5 → 214
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  2. XM_028841796.1 → XP_028697629.1  patatin-like phospholipase domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AQJ5
    Conserved Domains (1) summary
    cd07222
    Location:5 → 214
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  3. XM_028841797.1 → XP_028697630.1  patatin-like phospholipase domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A5F8AQJ5
    Related
    ENSMMUP00000079346.1, ENSMMUT00000092551.1
    Conserved Domains (1) summary
    cd07222
    Location:5 → 214
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  4. XM_028841799.1 → XP_028697632.1  patatin-like phospholipase domain-containing protein 4 isoform X6

    UniProtKB/TrEMBL
    H9EZ63
    Conserved Domains (1) summary
    cd07222
    Location:5 → 211
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  5. XM_015126906.2 → XP_014982392.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    F7E9K3
    Related
    ENSMMUP00000076924.1, ENSMMUT00000086146.1
    Conserved Domains (1) summary
    cd07222
    Location:5 → 250
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  6. XM_028841798.1 → XP_028697631.1  patatin-like phospholipase domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    H9EZ63
    Related
    ENSMMUP00000062621.1, ENSMMUT00000090616.1
    Conserved Domains (1) summary
    cd07222
    Location:5 → 210
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
Nucleotide Protein
Heading Accession and Version

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