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PDSS1 decaprenyl diphosphate synthase subunit 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707598, updated on 17-Aug-2024

Summary

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Official Symbol
PDSS1provided by VGNC
Official Full Name
decaprenyl diphosphate synthase subunit 1provided by VGNC
Primary source
VGNC:VGNC:75821
See related
Ensembl:ENSMMUG00000005076
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PDSS1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (27627268..27678166)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (26746677..26798098)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000077 Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein Neighboring gene uncharacterized LOC114669908 Neighboring gene uncharacterized LOC107000078 Neighboring gene abl interactor 1 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
decaprenyl-diphosphate synthase subunit 1
Names
prenyl (decaprenyl) diphosphate synthase, subunit 1
XP_001102166.1
XP_028681918.1
XP_028681919.1
XP_028681920.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    27627268..27678166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001102166.4 → XP_001102166.1  decaprenyl-diphosphate synthase subunit 1 isoform X1

    See identical proteins and their annotated locations for XP_001102166.1

    UniProtKB/TrEMBL
    A0A5F8AIJ9
    Related
    ENSMMUP00000076830.1, ENSMMUT00000101997.1
    Conserved Domains (2) summary
    PLN02890
    Location:47 → 415
    PLN02890; geranyl diphosphate synthase
    cl00210
    Location:102 → 413
    Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1

  2. XM_028826087.1 → XP_028681920.1  decaprenyl-diphosphate synthase subunit 1 isoform X4

    Conserved Domains (1) summary
    cl00210
    Location:1 → 243
    Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1

  3. XM_028826086.1 → XP_028681919.1  decaprenyl-diphosphate synthase subunit 1 isoform X3

    Conserved Domains (1) summary
    cd00685
    Location:121 → 282
    Trans_IPPS_HT; Trans-Isoprenyl Diphosphate Synthases, head-to-tail

  4. XM_028826085.1 → XP_028681918.1  decaprenyl-diphosphate synthase subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZT32
    Related
    ENSMMUP00000068776.1, ENSMMUT00000098603.1
    Conserved Domains (1) summary
    cl00210
    Location:2 → 290
    Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1

RNA

  1. XR_003719197.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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