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LOC6537301 cGMP-specific 3',5'-cyclic phosphodiesterase [ Drosophila yakuba ]

Gene ID: 6537301, updated on 10-May-2024

Summary

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Gene symbol
LOC6537301
Gene description
cGMP-specific 3',5'-cyclic phosphodiesterase
Locus tag
Dyak_GE26445
See related
EnsemblRapid:LOC6537301
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Pde6; GE26445; GE26445-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6537301 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 3R NC_052530.2 (17846336..17891555)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 3R NC_052530.1 (17846388..17891606)

Chromosome 3R - NC_052530.2Genomic Context describing neighboring genes Neighboring gene cell wall protein DAN4 Neighboring gene uncharacterized LOC6537300 Neighboring gene Cytochrome P450 313a1 Neighboring gene ribosomal RNA processing protein 36 homolog Neighboring gene mitochondrial ribosomal protein L11 Neighboring gene HTRA2-related serine protease

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cGMP-specific 3',5'-cyclic phosphodiesterase
Names
Dyak\GE26445
Dyak\GE26445-PA
dyak_GLEANR_9985

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052530.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    17846336..17891555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002097823.4 → XP_002097859.1  cGMP-specific 3',5'-cyclic phosphodiesterase

    See identical proteins and their annotated locations for XP_002097859.1

    UniProtKB/Swiss-Prot
    B4PSS5
    Related
    XP_002097859.1, XM_002097823.4
    Conserved Domains (2) summary
    smart00065
    Location:278 → 437
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:748 → 981
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B4PSS5.1 GenPept UniProtKB/Swiss-Prot:B4PSS5

Gene LinkOut

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Molecular Biology Databases
Research Materials