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VDAC1P1 voltage dependent anion channel 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 642585, updated on 17-Sep-2024

Summary

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Official Symbol
VDAC1P1provided by HGNC
Official Full Name
voltage dependent anion channel 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:12671
See related
AllianceGenome:HGNC:12671
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
VDAC1P
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Genomic context

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See VDAC1P1 in Genome Data Viewer
Location:
Xq21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (80929424..80931207)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (79363205..79364988)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (80184923..80186706)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA ACA64 Neighboring gene RNA, U6 small nuclear 493, pseudogene Neighboring gene RNA, U6 small nuclear 995, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29791 Neighboring gene high mobility group nucleosome binding domain 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29792

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcript map of the human chromosome Xq11-Xq21 region: localization of 33 novel genes and one pseudogene. Villard L, et al. Gene, 1999 Jul 22. PMID 10415331
  2. Cloning and functional expression in yeast of two human isoforms of the outer mitochondrial membrane channel, the voltage-dependent anion channel. Blachly-Dyson E, et al. J Biol Chem, 1993 Jan 25. PMID 8420959
  3. Human genes encoding the voltage-dependent anion channel (VDAC) of the outer mitochondrial membrane: mapping and identification of two new isoforms. Blachly-Dyson E, et al. Genomics, 1994 Mar 1. PMID 7517385
  4. Mapping of the human Voltage-Dependent Anion Channel isoforms 1 and 2 reconsidered. Messina A, et al. Biochem Biophys Res Commun, 1999 Feb 24. PMID 10049775
  5. Utility of syntenic relationships of VDAC1 pseudogenes for not only an understanding of the phylogenetic divergence history of rodents, but also ascertaining possible pseudogene candidates as genuine pseudogenes. Ido Y, et al. Genomics, 2014 Aug. PMID 24858958

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • voltage-dependent anion channel 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001224.3 

    Range
    101..1884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    80929424..80931207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    79363205..79364988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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