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NRON non-coding repressor of NFAT [ Homo sapiens (human) ]

Gene ID: 641373, updated on 5-Mar-2024

Summary

Official Symbol
NRONprovided by HGNC
Official Full Name
non-coding repressor of NFATprovided by HGNC
Primary source
HGNC:HGNC:37079
See related
MIM:609618; AllianceGenome:HGNC:37079
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00194
Summary
Predicted to act upstream of or within negative regulation of dephosphorylation; regulation of calcineurin-NFAT signaling cascade; and regulation of cytokine production. Predicted to be part of ribonucleoprotein complex. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
9q33.3; 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (126407775..126410504, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (138613545..138616268, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (129170054..129172783, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376275 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20285 Neighboring gene uncharacterized LOC101929116 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20286 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129089674-129090325 Neighboring gene Sharpr-MPRA regulatory region 7128 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129097847-129098348 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129098349-129098848 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129109020-129109980 Neighboring gene multivesicular body subunit 12B Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129138261-129138866 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129138867-129139471 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129141601-129142508 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20287 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129177967-129178559 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129183037-129183720 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129183721-129184405 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129185921-129186420 Neighboring gene uncharacterized LOC124902337 Neighboring gene VISTA enhancer hs186 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129214117-129214618 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:129236685-129237884 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129238046-129238625 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129238626-129239204 Neighboring gene Sharpr-MPRA regulatory region 3753 Neighboring gene Sharpr-MPRA regulatory region 6068 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129270146-129270646 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20288 Neighboring gene uncharacterized LOC105376276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29016 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129281950-129282456

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • non-protein coding RNA, repressor of NFAT
  • noncoding repressor of NFAT

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045006.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006443

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    126407775..126410504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    138613545..138616268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)