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NUBPL NUBP iron-sulfur cluster assembly factor, mitochondrial [ Bos taurus (domestic cattle) ]

Gene ID: 614641, updated on 10-Oct-2024

Summary

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Official Symbol
NUBPLprovided by VGNC
Official Full Name
NUBP iron-sulfur cluster assembly factor, mitochondrialprovided by VGNC
Primary source
VGNC:VGNC:32317
See related
Ensembl:ENSBTAG00000044121
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See NUBPL in Genome Data Viewer
Location:
chromosome: 21
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 21 NC_037348.1 (42056651..42502817)

Chromosome 21 - NC_037348.1Genomic Context describing neighboring genes Neighboring gene D-aminoacyl-tRNA deacylase 2 Neighboring gene G protein-coupled receptor 33 Neighboring gene 5-hydroxytryptamine receptor 1D-like Neighboring gene U2 spliceosomal RNA Neighboring gene Rho GTPase activating protein 5 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent FeS chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial respiratory chain complex I assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
iron-sulfur cluster transfer protein NUBPL; iron-sulfur protein NUBPL
Names
nucleotide binding protein like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193042.1 → NP_001179971.1  iron-sulfur cluster transfer protein NUBPL

    See identical proteins and their annotated locations for NP_001179971.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000021
    UniProtKB/TrEMBL
    E1BE32
    Related
    ENSBTAP00000053647.3, ENSBTAT00000061529.4
    Conserved Domains (2) summary
    COG0489
    Location:28 → 284
    Mrp; Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster [Cell cycle control, cell division, chromosome partitioning]
    pfam10609
    Location:65 → 311
    ParA; NUBPL iron-transfer P-loop NTPase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    42056651..42502817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024981927.2 → XP_024837695.1  iron-sulfur protein NUBPL isoform X1

    UniProtKB/TrEMBL
    A0AAA9SLE8, A0AAA9TAY8
    Conserved Domains (1) summary
    pfam10609
    Location:66 → 300
    ParA; NUBPL iron-transfer P-loop NTPase

  2. XM_024981928.2 → XP_024837696.1  iron-sulfur protein NUBPL isoform X1

    UniProtKB/TrEMBL
    A0AAA9SLE8, A0AAA9TAY8
    Related
    ENSBTAP00000095163.1, ENSBTAT00000111471.1
    Conserved Domains (1) summary
    pfam10609
    Location:66 → 300
    ParA; NUBPL iron-transfer P-loop NTPase

  3. XM_010817164.4 → XP_010815466.1  iron-sulfur protein NUBPL isoform X3

    UniProtKB/TrEMBL
    A0AAA9RTQ9, A0AAA9SVS3
    Related
    ENSBTAP00000088297.1, ENSBTAT00000126159.1
    Conserved Domains (2) summary
    COG0489
    Location:28 → 284
    Mrp; Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster [Cell cycle control, cell division, chromosome partitioning]
    pfam10609
    Location:65 → 309
    ParA; NUBPL iron-transfer P-loop NTPase

  4. XM_059879160.1 → XP_059735143.1  iron-sulfur protein NUBPL isoform X2

    UniProtKB/TrEMBL
    A0AAA9SPH1
    Related
    ENSBTAP00000084811.1, ENSBTAT00000130963.1

  5. XM_059879161.1 → XP_059735144.1  iron-sulfur protein NUBPL isoform X4

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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