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ATP4B ATPase H+/K+ transporting subunit beta [ Bos taurus (domestic cattle) ]

Gene ID: 614308, updated on 4-Oct-2024

Summary

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Official Symbol
ATP4Bprovided by VGNC
Official Full Name
ATPase H+/K+ transporting subunit betaprovided by VGNC
Primary source
VGNC:VGNC:26298
See related
BGD:BT18703; Ensembl:ENSBTAG00000019961
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ATP4B in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (86741886..86746823, complement)

Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene defective in cullin neddylation 1 domain containing 2 Neighboring gene transmembrane and coiled-coil domains 3 Neighboring gene transcription factor Dp-1 Neighboring gene G protein-coupled receptor kinase 1 Neighboring gene transmembrane protein 255B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion export across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sodium:potassium-exchanging ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium-transporting ATPase subunit beta
Names
ATPase H+/K+ transporting beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206140.1 → NP_001193069.1  potassium-transporting ATPase subunit beta

    See identical proteins and their annotated locations for NP_001193069.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000012
    UniProtKB/TrEMBL
    E1BLX8
    Related
    ENSBTAP00000026587.4, ENSBTAT00000026587.6
    Conserved Domains (1) summary
    TIGR01107
    Location:2 → 290
    Na_K_ATPase_bet; Sodium Potassium ATPase beta subunit

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    86741886..86746823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059892113.1 → XP_059748096.1  potassium-transporting ATPase subunit beta isoform X2

  2. XM_005213987.5 → XP_005214044.1  potassium-transporting ATPase subunit beta isoform X1

    Conserved Domains (1) summary
    TIGR01107
    Location:2 → 288
    Na_K_ATPase_bet; Sodium Potassium ATPase beta subunit

  3. XM_005213989.5 → XP_005214046.1  potassium-transporting ATPase subunit beta isoform X3

    Conserved Domains (1) summary
    cl08255
    Location:2 → 237
    Na_K-ATPase; Sodium / potassium ATPase beta chain

  4. XM_005213990.5 → XP_005214047.1  potassium-transporting ATPase subunit beta isoform X4

    Conserved Domains (1) summary
    cl08255
    Location:2 → 238
    Na_K-ATPase; Sodium / potassium ATPase beta chain
Nucleotide Protein Strain
Heading Accession and Version

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