U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MED22 mediator complex subunit 22 [ Bos taurus (domestic cattle) ]

Gene ID: 613736, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
MED22provided by VGNC
Official Full Name
mediator complex subunit 22provided by VGNC
Primary source
VGNC:VGNC:31359
See related
BGD:BT29121; Ensembl:ENSBTAG00000011556
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
SURF5
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MED22 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (104249112..104255720, complement)

Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase Neighboring gene surfeit 6 Neighboring gene small nucleolar RNA SNORD24 Neighboring gene small nucleolar RNA SNORD24 Neighboring gene ribosomal protein L7a

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mediator of RNA polymerase II transcription subunit 22
Names
surfeit 5
surfeit locus protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034742.1 → NP_001029914.1  mediator of RNA polymerase II transcription subunit 22

    See identical proteins and their annotated locations for NP_001029914.1

    Status: PROVISIONAL

    Source sequence(s)
    BT020918
    UniProtKB/Swiss-Prot
    A6QM07, Q5E9K2
    Related
    ENSBTAP00000015357.2, ENSBTAT00000015357.3
    Conserved Domains (1) summary
    pfam06179
    Location:20 → 124
    Med22; Surfeit locus protein 5 subunit 22 of Mediator complex

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    104249112..104255720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059891464.1 → XP_059747447.1  mediator of RNA polymerase II transcription subunit 22 isoform X2

  2. XM_005213360.5 → XP_005213417.1  mediator of RNA polymerase II transcription subunit 22 isoform X1

    See identical proteins and their annotated locations for XP_005213417.1

    UniProtKB/Swiss-Prot
    A6QM07, Q5E9K2
    Conserved Domains (1) summary
    pfam06179
    Location:20 → 124
    Med22; Surfeit locus protein 5 subunit 22 of Mediator complex
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5E9K2.1 GenPept UniProtKB/Swiss-Prot:Q5E9K2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.