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RETN resistin [ Canis lupus familiaris (dog) ]

Gene ID: 611540, updated on 17-Aug-2024

Summary

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Official Symbol
RETNprovided by VGNC
Official Full Name
resistinprovided by VGNC
Primary source
VGNC:VGNC:45482
See related
Ensembl:ENSCAFG00845027860
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See RETN in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (52963476..52964967)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (52238221..52239712)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (52842073..52843564)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (52167243..52168734)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (52610828..52612319)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene protein PET100 homolog, mitochondrial Neighboring gene Purkinje cell protein 2 Neighboring gene syntaxin binding protein 2 Neighboring gene mast cell expressed membrane protein 1 Neighboring gene trafficking protein particle complex subunit 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Resistin impairs endothelium-dependent dilation to bradykinin, but not acetylcholine, in the coronary circulation. Dick GM, et al. Am J Physiol Heart Circ Physiol, 2006 Dec. PMID 16905596
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Pathophysiologically relevant concentrations of resistin have little or no effect on coronary blood flow but do impair endothelial function
    Title: Resistin impairs endothelium-dependent dilation to bradykinin, but not acetylcholine, in the coronary circulation.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
resistin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    52963476..52964967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428780.1 → XP_038284708.1  resistin

    UniProtKB/TrEMBL
    A0A8C0LIR6, A0A8C0PKD7, A0A8I3Q3Q7
    Related
    ENSCAFP00845038566.1, ENSCAFT00845049152.1
    Conserved Domains (1) summary
    pfam06954
    Location:21 → 105
    Resistin

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    52167243..52168734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504416.1 → XP_038360344.1  resistin

    Conserved Domains (1) summary
    pfam06954
    Location:21 → 105
    Resistin

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    52610828..52612319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631607.1 → XP_038487535.1  resistin

    Conserved Domains (1) summary
    pfam06954
    Location:21 → 105
    Resistin

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    52842073..52843564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567459.1 → XP_038423387.1  resistin

    UniProtKB/TrEMBL
    A0A8C0LIR6, A0A8C0PKD7, A0A8I3Q3Q7
    Conserved Domains (1) summary
    pfam06954
    Location:21 → 105
    Resistin

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    52238221..52239712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_849220.6 → XP_854313.1  resistin

    UniProtKB/TrEMBL
    A0A8C0LIR6, A0A8C0PKD7, A0A8I3Q3Q7
    Conserved Domains (1) summary
    pfam06954
    Location:21 → 105
    Resistin
Nucleotide Protein
Heading Accession and Version

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