slc3a1 solute carrier family 3 member 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: slc3a1provided by ZNC
Official Full Name: solute carrier family 3 member 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-090313-225
See related: Ensembl:ENSDARG00000017165 AllianceGenome:ZFIN:ZDB-GENE-090313-225
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:dkey-202m23.2
Summary: Predicted to be involved in amino acid transport. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Is expressed in enterocyte; intestine; pronephric proximal convoluted tubule; pronephric proximal straight tubule; and pronephros. Human ortholog(s) of this gene implicated in cystinuria. Orthologous to human SLC3A1 (solute carrier family 3 member 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (10649511..10672427, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (10517612..10540037, complement)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Process	Evidence Code	Pubs
involved_in amino acid transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

Preferred Names: neutral and basic amino acid transport protein rBAT; amino acid transporter heavy chain SLC3A1

Names: solute carrier family 3 (amino acid transporter heavy chain), member 1; solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1

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The following sections contain reference sequences that belong to a specific genome build. Explain