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fbxo22 F-box protein 22 [ Danio rerio (zebrafish) ]

Gene ID: 556909, updated on 2-Nov-2024

Summary

Official Symbol
fbxo22provided by ZNC
Official Full Name
F-box protein 22provided by ZNC
Primary source
ZFIN:ZDB-GENE-040724-68
See related
Ensembl:ENSDARG00000053505 AllianceGenome:ZFIN:ZDB-GENE-040724-68
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:busm1-132m23.3
Summary
Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; protein polyubiquitination; and regulation of skeletal muscle fiber development. Orthologous to human FBXO22 (F-box protein 22). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fbxo22 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (29962539..29970435)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (29691428..29697724)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene talin 2a Neighboring gene alpha-tropomyosin Neighboring gene ISL LIM homeobox 2b Neighboring gene proline-serine-threonine phosphatase interacting protein 1b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030106.1NP_001025277.1  F-box only protein 22

    See identical proteins and their annotated locations for NP_001025277.1

    Status: PROVISIONAL

    Source sequence(s)
    AL845510
    UniProtKB/TrEMBL
    A0A8M1N7D1, Q5SPK4
    Related
    ENSDARP00000070020.3, ENSDART00000075538.6
    Conserved Domains (2) summary
    pfam00646
    Location:2564
    F-box; F-box domain
    pfam10442
    Location:290352
    FIST_C; FIST C domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    29962539..29970435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_011016167.1 RNA Sequence