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bud31 BUD31 homolog [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549113, updated on 17-Aug-2024

Summary

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Official Symbol
bud31provided by Xenbase
Official Full Name
BUD31 homologprovided by Xenbase
Primary source
Xenbase:XB-GENE-961904
See related
Ensembl:ENSXETG00000024872
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
g10; c77604
Orthologs
human mouse all
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Genomic context

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See bud31 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (41901022..41931213, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (32718708..32748971)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene actin related protein 2/3 complex subunit 1B Neighboring gene keratin-associated protein 16-1-like Neighboring gene PDGFA associated protein 1 Neighboring gene uncharacterized LOC100491360

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein BUD31 homolog
Names
maternal G10 transcript

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016359.3 → NP_001016359.2  protein BUD31 homolog

    See identical proteins and their annotated locations for NP_001016359.2

    Status: PROVISIONAL

    Source sequence(s)
    BC135529
    UniProtKB/TrEMBL
    A0A6I8RWP8, A0A803JPQ1, A4IHH6, F6VBW7
    Related
    ENSXETP00000117323.1, ENSXETT00000115005.1
    Conserved Domains (1) summary
    pfam01125
    Location:1 → 143
    G10; G10 protein

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    41901022..41931213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012970415.3 → XP_012825869.1  protein BUD31 homolog isoform X1

    See identical proteins and their annotated locations for XP_012825869.1

    UniProtKB/TrEMBL
    A0A6I8RWP8, A0A803JPQ1, A4IHH6, F6VBW7
    Related
    ENSXETP00000075739.1, ENSXETT00000093610.2
    Conserved Domains (1) summary
    pfam01125
    Location:1 → 143
    G10; G10 protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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