atp6v1h ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: atp6v1hprovided by Xenbase
Official Full Name: ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit Hprovided by Xenbase
Primary source: Xenbase:XB-GENE-1015115
See related: Ensembl:ENSXETG00000008095
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	6	NC_030682.2 (114804389..114843828, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	6	NC_030682.1 (99912384..99952287, complement)

Chromosome 6 - NC_030682.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables proton-transporting ATPase activity, rotational mechanism	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within bone development	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within bone mineralization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within eye pigmentation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within pigmentation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of neural retina development	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proton transmembrane transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within retina development in camera-type eye	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of vacuolar proton-transporting V-type ATPase, V1 domain	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: V-type proton ATPase subunit H

Names: ATPase, H+ transporting, lysosomal, V1 subunit H

NP_001016182.1

EC 7.1.2.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001016182.2 → NP_001016182.1 V-type proton ATPase subunit H

See identical proteins and their annotated locations for NP_001016182.1

Status: PROVISIONAL

Source sequence(s)

CR761830

UniProtKB/TrEMBL

A0A6I8RWV4, B7ZSW8, F6ZE96

Related

ENSXETP00000017742.4, ENSXETT00000017742.5

Conserved Domains (1) summary

cd00256
Location:14 → 461

VATPase_H; regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The topology is ...