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LOC542098 zea floricaula/leafy 1 [ Zea mays ]

Gene ID: 542098, updated on 14-Dec-2023

Summary

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Gene symbol
LOC542098
Gene description
zea floricaula/leafy 1
Locus tag
ZEAMMB73_Zm00001d026231
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
fl1; zfl1; LEAFY-like; GRMZM2G098813
Annotation information
Annotation category: suggests misassembly
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Genomic context

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See LOC542098 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 10 NC_050105.1 (143018343..143021187)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 10 NC_024468.2 (141561922..141564766)

Chromosome 10 - NC_050105.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 - ribosome protein pseudogene Neighboring gene histone H2A.2-like Neighboring gene uncharacterized LOC103642026 Neighboring gene uncharacterized LOC100384261 Neighboring gene scramblase family protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution of FLORICAULA/LEAFY orthologs in the Andropogoneae (Poaceae). Bomblies K, et al. Mol Biol Evol, 2005 Apr. PMID 15689530
  2. Duplicate FLORICAULA/LEAFY homologs zfl1 and zfl2 control inflorescence architecture and flower patterning in maize. Bomblies K, et al. Development, 2003 Jun. PMID 12702653
  3. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zea floricaula/leafy 1
Names
FLO/LFY
Zea floricaula/leafy1
floricaula/leafy-like 1
ucsd
ucsd(lfy)
ucsd(lfyA)
zfl1 Mutator
zlfy

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111731.1 → NP_001105201.1  zea floricaula/leafy 1

    See identical proteins and their annotated locations for NP_001105201.1

    Status: PROVISIONAL

    Source sequence(s)
    AY179882
    UniProtKB/TrEMBL
    A0A3L6GDN3, A0A8J8XDE5, Q84QG7, Q84QG8
    Conserved Domains (1) summary
    pfam01698
    Location:1 → 379
    FLO_LFY; Floricaula / Leafy protein

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050105.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    143018343..143021187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials