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MIER1 MIER1 transcriptional regulator [ Bos taurus (domestic cattle) ]

Gene ID: 538742, updated on 10-Oct-2024

Summary

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Official Symbol
MIER1provided by VGNC
Official Full Name
MIER1 transcriptional regulatorprovided by VGNC
Primary source
VGNC:VGNC:31469
See related
BGD:BT18646; Ensembl:ENSBTAG00000005443
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See MIER1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (78335914..78408805, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene chromosome 3 C1orf141 homolog Neighboring gene solute carrier family 35 member D1 Neighboring gene dynein axonemal intermediate chain 4 Neighboring gene translocon-associated protein subunit alpha-like Neighboring gene small nucleolar RNA SNORA70

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mesoderm induction early response protein 1
Names
mesoderm induction early response 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076913.1 → NP_001070381.1  mesoderm induction early response protein 1

    See identical proteins and their annotated locations for NP_001070381.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123513
    UniProtKB/TrEMBL
    A0A3S5ZPQ7, F1N4Z3, Q08DY2
    Related
    ENSBTAP00000082701.1, ENSBTAT00000125094.1
    Conserved Domains (3) summary
    smart00717
    Location:286 → 331
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11661
    Location:286 → 330
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:180 → 229
    ELM2; ELM2 domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    78335914..78408805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005204465.5 → XP_005204522.4  mesoderm induction early response protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A3S5ZPQ7
    Related
    ENSBTAP00000096541.1, ENSBTAT00000133453.1
    Conserved Domains (2) summary
    cd11661
    Location:339 → 383
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:233 → 282
    ELM2; ELM2 domain

  2. XM_005204463.5 → XP_005204520.4  mesoderm induction early response protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3S5ZPQ7
    Conserved Domains (2) summary
    cd11661
    Location:376 → 420
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:270 → 319
    ELM2; ELM2 domain

  3. XM_024989592.2 → XP_024845360.2  mesoderm induction early response protein 1 isoform X4

    Related
    ENSBTAP00000065806.2, ENSBTAT00000069972.2

  4. XM_059884764.1 → XP_059740747.1  mesoderm induction early response protein 1 isoform X2

  5. XM_059884765.1 → XP_059740748.1  mesoderm induction early response protein 1 isoform X6

  6. XM_059884763.1 → XP_059740746.1  mesoderm induction early response protein 1 isoform X1

  7. XM_005204473.5 → XP_005204530.1  mesoderm induction early response protein 1 isoform X9

    See identical proteins and their annotated locations for XP_005204530.1

    UniProtKB/TrEMBL
    A0A3Q1LXD3, A0A3S5ZPQ7
    Related
    ENSBTAP00000061859.1, ENSBTAT00000082165.2
    Conserved Domains (2) summary
    cd11661
    Location:303 → 347
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:197 → 246
    ELM2; ELM2 domain

  8. XM_024989593.2 → XP_024845361.1  mesoderm induction early response protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A3Q1LXD3, A0A3S5ZPQ7
    Conserved Domains (2) summary
    cd11661
    Location:303 → 347
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:197 → 246
    ELM2; ELM2 domain

  9. XM_059884767.1 → XP_059740750.1  mesoderm induction early response protein 1 isoform X8

  10. XM_005204477.4 → XP_005204534.1  mesoderm induction early response protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A3S5ZPQ7
    Related
    ENSBTAP00000094639.1, ENSBTAT00000135348.1
    Conserved Domains (2) summary
    cd11661
    Location:223 → 267
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:117 → 166
    ELM2; ELM2 domain

  11. XM_024989598.2 → XP_024845366.1  mesoderm induction early response protein 1 isoform X11

    UniProtKB/TrEMBL
    A0A3S5ZPQ7
    Conserved Domains (2) summary
    cd11661
    Location:259 → 303
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:153 → 202
    ELM2; ELM2 domain

  12. XM_005204474.4 → XP_005204531.1  mesoderm induction early response protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A3Q1MIX1, A0A3S5ZPQ7
    Related
    ENSBTAP00000071259.1, ENSBTAT00000076759.2
    Conserved Domains (2) summary
    cd11661
    Location:285 → 329
    SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
    pfam01448
    Location:179 → 228
    ELM2; ELM2 domain

  13. XM_059884766.1 → XP_059740749.1  mesoderm induction early response protein 1 isoform X7

Nucleotide Protein Strain
Heading Accession and Version

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