U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COL6A3 collagen type VI alpha 3 chain [ Bos taurus (domestic cattle) ]

Gene ID: 530657, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
COL6A3provided by VGNC
Official Full Name
collagen type VI alpha 3 chainprovided by VGNC
Primary source
VGNC:VGNC:27572
See related
BGD:BT21294; Ensembl:ENSBTAG00000030190
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See COL6A3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
45
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (116781707..116872733, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101906731 Neighboring gene COP9 signalosome subunit 8 Neighboring gene 40S ribosomal protein S16 pseudogene Neighboring gene uncharacterized LOC104970680

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
collagen alpha-3(VI) chain
Names
alpha 3 type VI collagen
collagen, type VI, alpha 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    116781707..116872733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059885240.1 → XP_059741223.1  collagen alpha-3(VI) chain

    Related
    ENSBTAP00000094962.1, ENSBTAT00000118734.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials