U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MGC133636 cystatin SC [ Bos taurus (domestic cattle) ]

Gene ID: 515992, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
MGC133636
Gene description
cystatin SC
See related
BGD:BT14415; Ensembl:ENSBTAG00000013416
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MGC133636 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (42104951..42108979)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene cystatin like 1 Neighboring gene cystatin 11 Neighboring gene cystatin Neighboring gene cystatin 8

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC133636

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable cystatin-16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038122.2 → NP_001033211.1  probable cystatin-16 precursor

    See identical proteins and their annotated locations for NP_001033211.1

    Status: PROVISIONAL

    Source sequence(s)
    BC109970
    UniProtKB/Swiss-Prot
    Q32KQ9
    Related
    ENSBTAP00000017853.2, ENSBTAT00000017853.4
    Conserved Domains (1) summary
    smart00043
    Location:39 → 126
    CY; Cystatin-like domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    42104951..42108979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q32KQ9.1 GenPept UniProtKB/Swiss-Prot:Q32KQ9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials