CPT1C carnitine palmitoyltransferase 1C [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: CPT1Cprovided by VGNC
Official Full Name: carnitine palmitoyltransferase 1Cprovided by VGNC
Primary source: VGNC:VGNC:27678
See related: BGD:BT22853; Ensembl:ENSBTAG00000012205
Gene type: protein coding
RefSeq status: MODEL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	18	NC_037345.1 (56092276..56111414)

Chromosome 18 - NC_037345.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

This study evaluated the effects of nonesterified fatty acids and glucose on carnitine palmitoyltransferase-I (CPT-I) mRNA expression in cultured bovine hepatocytes using real-time reverse transcription polymerase chain reaction and ELISA methods.
Title: Effect of NEFA and glucose levels on CPT-I mRNA expression and translation in cultured bovine hepatocytes.

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Pathways from PubChem

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General gene information

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Markers

MARC_16138-16139:1018553825:1 (e-PCR)
- UniSTS:267975

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables carnitine O-palmitoyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in carnitine metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in fatty acid metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: carnitine O-palmitoyltransferase 1, brain isoform

Names: putative carnitine palmitoyltransferase IC

XP_002695166.2

EC 2.3.1.21

XP_059733067.1

EC 2.3.1.21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

Range

56092276..56111414

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_002695120.6 → XP_002695166.2 carnitine O-palmitoyltransferase 1, brain isoform isoform X1

UniProtKB/TrEMBL

F1N587

Related

ENSBTAP00000016188.7, ENSBTAT00000016188.7

Conserved Domains (2) summary

pfam00755
Location:171 → 755

Carn_acyltransf; Choline/Carnitine o-acyltransferase

pfam16484
Location:1 → 46

CPT_N; Carnitine O-palmitoyltransferase N-terminus
XM_059877084.1 → XP_059733067.1 carnitine O-palmitoyltransferase 1, brain isoform isoform X2