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ATP11A ATPase phospholipid transporting 11A [ Bos taurus (domestic cattle) ]

Gene ID: 512547, updated on 10-Oct-2024

Summary

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Official Symbol
ATP11Aprovided by VGNC
Official Full Name
ATPase phospholipid transporting 11Aprovided by VGNC
Primary source
VGNC:VGNC:26274
See related
BGD:BT14802; Ensembl:ENSBTAG00000000446
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ATP11A in Genome Data Viewer
Location:
chromosome: 12
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (86287851..86392585)

Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449095 Neighboring gene uncharacterized LOC104973680 Neighboring gene uncharacterized LOC112449096 Neighboring gene uncharacterized LOC112449097 Neighboring gene uncharacterized LOC132346807 Neighboring gene uncharacterized LOC101902815 Neighboring gene MCF.2 cell line derived transforming sequence like Neighboring gene uncharacterized LOC101902449

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase IH; phospholipid-transporting ATPase IH
XP_002692059.3
XP_010809308.1
XP_024855942.1
XP_024855943.1
XP_024855944.1
XP_059748325.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    86287851..86392585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025000176.2 → XP_024855944.1  phospholipid-transporting ATPase IH isoform X4

    UniProtKB/TrEMBL
    A0A3Q1M288, A0A3Q1MCZ4
    Related
    ENSBTAP00000067508.1, ENSBTAT00000085751.2
    Conserved Domains (1) summary
    cd02073
    Location:48 → 984
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  2. XM_059892342.1 → XP_059748325.1  phospholipid-transporting ATPase IH isoform X5

  3. XM_002692013.7 → XP_002692059.3  phospholipid-transporting ATPase IH isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCZ4
    Conserved Domains (6) summary
    TIGR01652
    Location:65 → 1130
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:122 → 207
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:497 → 607
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:62 → 115
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:871 → 1123
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cl21460
    Location:826 → 869
    HAD_like; Haloacid Dehalogenase-like Hydrolases

  4. XM_025000174.2 → XP_024855942.1  phospholipid-transporting ATPase IH isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MCZ4, F1N0J3
    Conserved Domains (1) summary
    cd02073
    Location:67 → 1003
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  5. XM_010811006.4 → XP_010809308.1  phospholipid-transporting ATPase IH isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MCZ4, F1N0J3
    Related
    ENSBTAP00000042566.5, ENSBTAT00000045151.5
    Conserved Domains (1) summary
    cd02073
    Location:67 → 1003
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C

  6. XM_025000175.2 → XP_024855943.1  phospholipid-transporting ATPase IH isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MCZ4
    Conserved Domains (1) summary
    cd02073
    Location:67 → 1003
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
Nucleotide Protein Strain
Heading Accession and Version

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