U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SDAD1 SDA1 domain containing 1 [ Bos taurus (domestic cattle) ]

Gene ID: 507675, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
SDAD1provided by VGNC
Official Full Name
SDA1 domain containing 1provided by VGNC
Primary source
VGNC:VGNC:34377
See related
Ensembl:ENSBTAG00000007639
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SDAD1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (90809711..90841174, complement)

Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase with EF-hand domain 2 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene N-acylethanolamine acid amidase Neighboring gene C-X-C motif chemokine ligand 9 Neighboring gene ADP-ribosyltransferase 3 (inactive) Neighboring gene C-X-C motif chemokine ligand 10

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC139231

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein SDA1 homolog
Names
SDA1 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102489.1 → NP_001095959.1  protein SDA1 homolog

    See identical proteins and their annotated locations for NP_001095959.1

    Status: PROVISIONAL

    Source sequence(s)
    BC140502
    UniProtKB/Swiss-Prot
    A5D7C2
    UniProtKB/TrEMBL
    F1N222
    Related
    ENSBTAP00000007240.6, ENSBTAT00000007240.6
    Conserved Domains (2) summary
    pfam05285
    Location:409 → 685
    SDA1; SDA1
    pfam08158
    Location:62 → 111
    NUC130_3NT; NUC130/3NT domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    90809711..90841174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A5D7C2.1 GenPept UniProtKB/Swiss-Prot:A5D7C2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials