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fam107a.S family with sequence similarity 107 member A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494764, updated on 18-Sep-2024

Summary

Official Symbol
fam107a.S
Official Full Name
family with sequence similarity 107 member A S homeolog
Primary source
Xenbase:XB-GENE-986181
See related
EnsemblRapid:ENSXLAG00005005583
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
drr1; tu3a; xdrr1; fam107a
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Genomic context

See fam107a.S in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (149543209..149568579)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694865.1 (224989..250545)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene extended synaptotagmin-1-like Neighboring gene ficolin-1 Neighboring gene extended synaptotagmin-1-like Neighboring gene ADP ribosylation factor 4 L homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein LOC494764
Names
family with sequence similarity 107, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094600.1NP_001088069.1  uncharacterized protein LOC494764

    See identical proteins and their annotated locations for NP_001088069.1

    Status: PREDICTED

    Source sequence(s)
    BC082866
    UniProtKB/TrEMBL
    Q63ZP4
    Related
    ENSXLAP00005016476.1, ENSXLAT00005016772.1
    Conserved Domains (1) summary
    pfam06625
    Location:23135
    DUF1151; Protein of unknown function (DUF1151)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    149543209..149568579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)