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rpp30.L ribonuclease P/MRP 30kDa subunit L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494740, updated on 4-Nov-2024

Summary

Official Symbol
rpp30.L
Official Full Name
ribonuclease P/MRP 30kDa subunit L homeolog
Primary source
Xenbase:XB-GENE-993931
Locus tag
XELAEV_18034759mg
See related
EnsemblRapid:ENSXLAG00005035676 AllianceGenome:Xenbase:XB-GENE-993931
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rpp30
Summary
Predicted to enable RNA binding activity. Predicted to act upstream of or within tRNA processing. Predicted to be part of nucleolar ribonuclease P complex. Orthologous to human RPP30 (ribonuclease P/MRP subunit p30). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See rpp30.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (33188952..33211441)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (31584302..31606873)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled.L Neighboring gene intelectin 1 L homeolog Neighboring gene ankyrin repeat domain 1 (cardiac muscle) L homeolog Neighboring gene polycomb group ring finger 5 L homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within tRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of nucleolar ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribonuclease P/MRP 30kDa subunit L homeolog
NP_001088047.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094578.1NP_001088047.1  ribonuclease P/MRP 30kDa subunit L homeolog

    See identical proteins and their annotated locations for NP_001088047.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082834
    UniProtKB/TrEMBL
    A0A974CFJ4, Q63ZS6
    Related
    ENSXLAP00005106642.1, ENSXLAT00005108752.1
    Conserved Domains (1) summary
    pfam01876
    Location:5224
    RNase_P_p30; RNase P subunit p30

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    33188952..33211441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)