U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

txn2 thioredoxin 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 493523, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
txn2provided by Xenbase
Official Full Name
thioredoxin 2provided by Xenbase
Primary source
Xenbase:XB-GENE-943373
See related
Ensembl:ENSXETG00000035461 AllianceGenome:Xenbase:XB-GENE-943373
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable protein-disulfide reductase activity. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 29. Orthologous to human TXN2 (thioredoxin 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See txn2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (115522321..115535301, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (105527849..105540689, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 38 Neighboring gene myosin, heavy chain 9, non-muscle Neighboring gene FAD-dependent oxidoreductase domain containing 2 Neighboring gene RAB11 family interacting protein 4 (class II) like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC79505

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables protein-disulfide reductase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
thioredoxin, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008160.1 → NP_001008161.1  thioredoxin, mitochondrial

    See identical proteins and their annotated locations for NP_001008161.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082341
    UniProtKB/TrEMBL
    A0A6I8RIB3, Q641J6
    Conserved Domains (1) summary
    cl00388
    Location:69 → 168
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    115522321..115535301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012960964.2 → XP_012816418.1  thioredoxin, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_012816418.1

    UniProtKB/TrEMBL
    A0A6I8RIB3, Q641J6
    Related
    ENSXETP00000084644.2, ENSXETT00000089705.2
    Conserved Domains (1) summary
    cl00388
    Location:69 → 168
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.