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ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 493518, updated on 17-Aug-2024

Summary

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Official Symbol
ywhaeprovided by Xenbase
Official Full Name
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilonprovided by Xenbase
Primary source
Xenbase:XB-GENE-996375
See related
Ensembl:ENSXETG00000022893
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
mds; mdcr; kcip-1; 14-3-3e; 14-3-3epsilon
Orthologs
human mouse all
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Genomic context

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See ywhae in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (46046907..46069973, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (39501295..39524430)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene myosin IC Neighboring gene uncharacterized LOC108645762 Neighboring gene uncharacterized LOC100485552 Neighboring gene v-crk avian sarcoma virus CT10 oncogene homolog Neighboring gene N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides. Rana AA, et al. PLoS Genet, 2006 Nov 17. PMID 17112317, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC89915

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within axis elongation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within gastrulation with mouth forming second IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
14-3-3 protein epsilon
Names
14-3-3 epsilon
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008155.1 → NP_001008156.1  14-3-3 protein epsilon

    See identical proteins and their annotated locations for NP_001008156.1

    Status: PROVISIONAL

    Source sequence(s)
    BC081369
    UniProtKB/TrEMBL
    A0A6I8QPT3, Q66IF5
    Related
    ENSXETP00000074359.1, ENSXETT00000078196.2
    Conserved Domains (1) summary
    cd10020
    Location:4 → 233
    14-3-3_epsilon; 14-3-3 epsilon, an isoform of 14-3-3 protein

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    46046907..46069973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012956823.2 → XP_012812277.1  14-3-3 protein epsilon isoform X1

    UniProtKB/TrEMBL
    A0A6I8QPT3, A0A8J0SFA1
    Related
    ENSXETP00000049522.3, ENSXETT00000049522.3
    Conserved Domains (1) summary
    cd10020
    Location:4 → 233
    14-3-3_epsilon; 14-3-3 epsilon, an isoform of 14-3-3 protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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