U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 [ Canis lupus familiaris (dog) ]

Gene ID: 491154, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
CDK5R1provided by VGNC
Official Full Name
cyclin dependent kinase 5 regulatory subunit 1provided by VGNC
Primary source
VGNC:VGNC:39055
See related
Ensembl:ENSCAFG00845012076
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CDK5R1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (41302927..41318699, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (39645753..39661533, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (40458001..40473768, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (40089089..40104860, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (40383316..40399074, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097432 Neighboring gene myosin ID Neighboring gene uncharacterized LOC111097433 Neighboring gene proteasome 26S subunit, non-ATPase 11 Neighboring gene uncharacterized LOC111097434

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein kinase 5 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cyclin-dependent kinase 5 activator 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    41302927..41318699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038677360.1 → XP_038533288.1  cyclin-dependent kinase 5 activator 1

    UniProtKB/TrEMBL
    A0A8C0KJK1, A0A8C0NJQ9, A0A8I3NN20
    Related
    ENSCAFP00845016855.1, ENSCAFT00845021447.1
    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

  2. XM_038677359.1 → XP_038533287.1  cyclin-dependent kinase 5 activator 1

    UniProtKB/TrEMBL
    A0A8C0KJK1, A0A8C0NJQ9, A0A8I3NN20
    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    40089089..40104860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038486320.1 → XP_038342248.1  cyclin-dependent kinase 5 activator 1

    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

  2. XM_038486319.1 → XP_038342247.1  cyclin-dependent kinase 5 activator 1

    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    40383316..40399074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038612113.1 → XP_038468041.1  cyclin-dependent kinase 5 activator 1

    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

  2. XM_038612112.1 → XP_038468040.1  cyclin-dependent kinase 5 activator 1

    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    40458001..40473768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548146.1 → XP_038404074.1  cyclin-dependent kinase 5 activator 1

    UniProtKB/TrEMBL
    A0A8C0KJK1, A0A8C0NJQ9, A0A8I3NN20
    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

  2. XM_038548144.1 → XP_038404072.1  cyclin-dependent kinase 5 activator 1

    UniProtKB/TrEMBL
    A0A8C0KJK1, A0A8C0NJQ9, A0A8I3NN20
    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    39645753..39661533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022423314.2 → XP_022279022.1  cyclin-dependent kinase 5 activator 1

    UniProtKB/TrEMBL
    A0A8C0KJK1, A0A8C0NJQ9, A0A8I3NN20
    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein

  2. XM_022423313.2 → XP_022279021.1  cyclin-dependent kinase 5 activator 1

    UniProtKB/TrEMBL
    A0A8C0KJK1, A0A8C0NJQ9, A0A8I3NN20
    Conserved Domains (1) summary
    pfam03261
    Location:20 → 293
    CDK5_activator; Cyclin-dependent kinase 5 activator protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials