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ACADM acyl-CoA dehydrogenase medium chain [ Canis lupus familiaris (dog) ]

Gene ID: 490207, updated on 17-Aug-2024

Summary

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Official Symbol
ACADMprovided by VGNC
Official Full Name
acyl-CoA dehydrogenase medium chainprovided by VGNC
Primary source
VGNC:VGNC:37494
See related
Ensembl:ENSCAFG00845004219
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ACADM in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (71444858..71475297, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (73516991..73547426, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (71380006..71410441, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (70941180..70971613, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (70886684..70917117, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene Rab geranylgeranyltransferase subunit beta Neighboring gene small nucleolar RNA SNORD45 Neighboring gene adenylyl cyclase-associated protein 1-like Neighboring gene uncharacterized LOC119872372 Neighboring gene uncharacterized LOC102155113

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Light-activated BioID - an optically activated proximity labeling system to study protein-protein interactions. Shafraz O, et al. J Cell Sci, 2023 Oct 1. PMID 37756605, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables medium-chain fatty acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in medium-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-4 to C-12 straight chain
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
XP_038336229.1
XP_038397573.1
XP_038413360.1
XP_038461713.1
XP_038526314.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    71444858..71475297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038670386.1 → XP_038526314.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0KY30, A0A8C0P1X9, A0A8C0PQE1
    Related
    ENSCAFP00845005991.1, ENSCAFT00845007584.1
    Conserved Domains (1) summary
    cd01157
    Location:41 → 418
    MCAD; Medium chain acyl-CoA dehydrogenase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    70941180..70971613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480301.1 → XP_038336229.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    cd01157
    Location:41 → 418
    MCAD; Medium chain acyl-CoA dehydrogenase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    70886684..70917117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038605785.1 → XP_038461713.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    cd01157
    Location:41 → 418
    MCAD; Medium chain acyl-CoA dehydrogenase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    71380006..71410441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038541645.1 → XP_038397573.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0KY30, A0A8C0P1X9, A0A8C0PQE1
    Conserved Domains (1) summary
    cd01157
    Location:41 → 418
    MCAD; Medium chain acyl-CoA dehydrogenase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    73516991..73547426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038557432.1 → XP_038413360.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0KY30, A0A8C0P1X9, A0A8C0PQE1
    Conserved Domains (1) summary
    cd01157
    Location:41 → 418
    MCAD; Medium chain acyl-CoA dehydrogenase
Nucleotide Protein
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