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ACADVL acyl-CoA dehydrogenase very long chain [ Canis lupus familiaris (dog) ]

Gene ID: 489463, updated on 17-Aug-2024

Summary

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Official Symbol
ACADVLprovided by VGNC
Official Full Name
acyl-CoA dehydrogenase very long chainprovided by VGNC
Primary source
VGNC:VGNC:53258
See related
Ensembl:ENSCAFG00845019619
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ACADVL in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (32294698..32299874)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (32327393..32332562)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (32395976..32401145)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (32260008..32265180)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (32219055..32224215)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119871842 Neighboring gene asialoglycoprotein receptor 1 Neighboring gene discs large MAGUK scaffold protein 4 Neighboring gene uncharacterized LOC119871843 Neighboring gene microRNA mir-324 Neighboring gene dishevelled segment polarity protein 2 Neighboring gene PHD finger protein 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Nonsense Variant in the ACADVL Gene in German Hunting Terriers with Exercise Induced Metabolic Myopathy. Lepori V, et al. G3 (Bethesda), 2018 May 4. PMID 29491033, Free PMC Article
  2. Light-activated BioID - an optically activated proximity labeling system to study protein-protein interactions. Shafraz O, et al. J Cell Sci, 2023 Oct 1. PMID 37756605, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables very-long-chain fatty acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very long-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-Coenzyme A dehydrogenase, very long chain
XP_038331397.1
XP_038392565.1
XP_038456748.1
XP_038521290.1
XP_546581.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    32294698..32299874
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038665362.1 → XP_038521290.1  very long-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0K9C2, A0A8C0N881, A0A8I3P5V9, A0A8P0SKC2
    Related
    ENSCAFP00845027427.1, ENSCAFT00845035026.1
    Conserved Domains (1) summary
    cd01161
    Location:72 → 481
    VLCAD; Very long chain acyl-CoA dehydrogenase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    32260008..32265180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038475469.1 → XP_038331397.1  very long-chain specific acyl-CoA dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    cd01161
    Location:72 → 481
    VLCAD; Very long chain acyl-CoA dehydrogenase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    32219055..32224215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038600820.1 → XP_038456748.1  very long-chain specific acyl-CoA dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    cd01161
    Location:72 → 481
    VLCAD; Very long chain acyl-CoA dehydrogenase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    32395976..32401145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038536637.1 → XP_038392565.1  very long-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0K9C2, A0A8C0N881, A0A8I3P5V9, A0A8P0SKC2
    Conserved Domains (1) summary
    cd01161
    Location:72 → 481
    VLCAD; Very long chain acyl-CoA dehydrogenase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32327393..32332562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_546581.6 → XP_546581.3  very long-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0K9C2, A0A8C0N881, A0A8I3P5V9, A0A8P0SKC2
    Conserved Domains (1) summary
    cd01161
    Location:72 → 481
    VLCAD; Very long chain acyl-CoA dehydrogenase
Nucleotide Protein
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