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PDE11A phosphodiesterase 11A [ Canis lupus familiaris (dog) ]

Gene ID: 488422, updated on 17-Aug-2024

Summary

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Official Symbol
PDE11Aprovided by VGNC
Official Full Name
phosphodiesterase 11Aprovided by VGNC
Primary source
VGNC:VGNC:44346
See related
Ensembl:ENSCAFG00845020545
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PDE11A in Genome Data Viewer
Location:
chromosome: 36
Exon count:
20
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 36 NC_051840.1 (21484502..21846241, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 36 NC_006618.4 (21359186..21721039, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 36 NC_049257.1 (21671753..22033167, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 36 NC_049296.1 (21554639..21921057, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 36 NC_049777.1 (21556642..21918772, complement)

Chromosome 36 - NC_051840.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119867841 Neighboring gene uncharacterized LOC119867842 Neighboring gene uncharacterized LOC111094214 Neighboring gene uncharacterized LOC102152241 Neighboring gene uncharacterized LOC119867843 Neighboring gene cytosolic 5'-nucleotidase 3A-like Neighboring gene uncharacterized LOC111094216 Neighboring gene uncharacterized LOC100688700 Neighboring gene RNA binding motif protein 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A
XP_038302649.1
XP_038319163.1
XP_038377293.1
XP_038441018.1
XP_038504864.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051840.1 Reference ROS_Cfam_1.0

    Range
    21484502..21846241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038446721.1 → XP_038302649.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1

    UniProtKB/TrEMBL
    A0A8C0K169, A0A8C0P456, A0A8I3PA46
    Related
    ENSCAFP00845028338.1, ENSCAFT00845036216.1
    Conserved Domains (2) summary
    smart00065
    Location:210 → 373
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:656 → 891
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049296.1 Alternate UMICH_Zoey_3.1

    Range
    21554639..21921057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038521365.1 → XP_038377293.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X2

    Conserved Domains (2) summary
    smart00065
    Location:210 → 373
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:656 → 891
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049777.1 Alternate UNSW_CanFamBas_1.0

    Range
    21556642..21918772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038648936.1 → XP_038504864.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1

    Conserved Domains (2) summary
    smart00065
    Location:210 → 373
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:656 → 891
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049257.1 Alternate UU_Cfam_GSD_1.0

    Range
    21671753..22033167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585090.1 → XP_038441018.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1

    UniProtKB/TrEMBL
    A0A8C0K169, A0A8C0P456, A0A8I3PA46
    Conserved Domains (2) summary
    smart00065
    Location:210 → 373
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:656 → 891
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006618.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21359186..21721039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463235.1 → XP_038319163.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1

    UniProtKB/TrEMBL
    A0A8C0K169, A0A8C0P456, A0A8I3PA46
    Conserved Domains (2) summary
    smart00065
    Location:210 → 373
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:656 → 891
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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