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ALDH5A1 aldehyde dehydrogenase 5 family member A1 [ Canis lupus familiaris (dog) ]

Gene ID: 488246, updated on 17-Aug-2024

Summary

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Official Symbol
ALDH5A1provided by VGNC
Official Full Name
aldehyde dehydrogenase 5 family member A1provided by VGNC
Primary source
VGNC:VGNC:37787
See related
Ensembl:ENSCAFG00845018965
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ALDH5A1 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 35 NC_051839.1 (22678366..22704116)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 35 NC_006617.4 (22524175..22552036)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 35 NC_049256.1 (23968214..23996095)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 35 NC_049295.1 (22483861..22512841)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 35 NC_049776.1 (22532027..22557461)

Chromosome 35 - NC_051839.1Genomic Context describing neighboring genes Neighboring gene magnesium transporter MRS2 Neighboring gene glycosylphosphatidylinositol specific phospholipase D1 Neighboring gene KIAA0319 Neighboring gene tyrosyl-DNA phosphodiesterase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinate-semialdehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate-semialdehyde dehydrogenase, mitochondrial
Names
aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase)
XP_038302083.1
XP_038318930.1
XP_038376742.1
XP_038439899.1
XP_038504316.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051839.1 Reference ROS_Cfam_1.0

    Range
    22678366..22704116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038446155.1 → XP_038302083.1  succinate-semialdehyde dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0RLX6
    Related
    ENSCAFP00845026621.1, ENSCAFT00845034017.1
    Conserved Domains (1) summary
    TIGR01780
    Location:54 → 504
    SSADH; succinate-semialdehyde dehydrogenase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049295.1 Alternate UMICH_Zoey_3.1

    Range
    22483861..22512841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038520814.1 → XP_038376742.1  succinate-semialdehyde dehydrogenase, mitochondrial

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049776.1 Alternate UNSW_CanFamBas_1.0

    Range
    22532027..22557461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038648388.1 → XP_038504316.1  succinate-semialdehyde dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    TIGR01780
    Location:54 → 504
    SSADH; succinate-semialdehyde dehydrogenase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049256.1 Alternate UU_Cfam_GSD_1.0

    Range
    23968214..23996095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038583971.1 → XP_038439899.1  succinate-semialdehyde dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0TN20

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006617.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    22524175..22552036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463002.1 → XP_038318930.1  succinate-semialdehyde dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0RLX6
    Conserved Domains (1) summary
    TIGR01780
    Location:54 → 504
    SSADH; succinate-semialdehyde dehydrogenase
Nucleotide Protein
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