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MFSD12 major facilitator superfamily domain containing 12 [ Canis lupus familiaris (dog) ]

Gene ID: 485058, updated on 17-Aug-2024

Summary

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Official Symbol
MFSD12provided by VGNC
Official Full Name
major facilitator superfamily domain containing 12provided by VGNC
Primary source
VGNC:VGNC:43198
See related
Ensembl:ENSCAFG00845009196
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
C20H19orf28
Orthologs
human mouse all
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Genomic context

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See MFSD12 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (56514447..56522856)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (55579634..55588060)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (56252252..56260682)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (55570115..55578534)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (56053492..56061939)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene GIPC PDZ domain containing family member 3 Neighboring gene high mobility group 20B Neighboring gene tektin bundle interacting protein 1 Neighboring gene fizzy and cell division cycle 20 related 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a Missense Variant in MFSD12 Involved in Dilution of Phaeomelanin Leading to White or Cream Coat Color in Dogs. Hédan B, et al. Genes (Basel), 2019 May 21. PMID 31117290, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major facilitator superfamily domain-containing protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    56514447..56522856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038429143.1 → XP_038285071.1  major facilitator superfamily domain-containing protein 12 isoform X1

    UniProtKB/Swiss-Prot
    F1PZV2
    UniProtKB/TrEMBL
    A0A8C0QR18, A0A8I3NAR7, A0A8P0PIK8
    Related
    ENSCAFP00845012605.1, ENSCAFT00845016204.1
    Conserved Domains (1) summary
    cd17491
    Location:22 → 467
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

  2. XM_038429144.1 → XP_038285072.1  major facilitator superfamily domain-containing protein 12 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L130
    Conserved Domains (1) summary
    cd17491
    Location:23 → 389
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

  3. XM_038429145.1 → XP_038285073.1  major facilitator superfamily domain-containing protein 12 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L130
    Conserved Domains (1) summary
    cd17491
    Location:16 → 383
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    55570115..55578534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504704.1 → XP_038360632.1  major facilitator superfamily domain-containing protein 12 isoform X1

  2. XM_038504705.1 → XP_038360633.1  major facilitator superfamily domain-containing protein 12 isoform X2

    Conserved Domains (1) summary
    cd17491
    Location:23 → 389
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

  3. XM_038504706.1 → XP_038360634.1  major facilitator superfamily domain-containing protein 12 isoform X3

    Conserved Domains (1) summary
    cd17491
    Location:16 → 383
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    56053492..56061939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631940.1 → XP_038487868.1  major facilitator superfamily domain-containing protein 12 isoform X1

  2. XM_038631941.1 → XP_038487869.1  major facilitator superfamily domain-containing protein 12 isoform X2

  3. XM_038631942.1 → XP_038487870.1  major facilitator superfamily domain-containing protein 12 isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    56252252..56260682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567816.1 → XP_038423744.1  major facilitator superfamily domain-containing protein 12 isoform X1

    UniProtKB/Swiss-Prot
    F1PZV2
    UniProtKB/TrEMBL
    A0A8C0QR18

  2. XM_038567817.1 → XP_038423745.1  major facilitator superfamily domain-containing protein 12 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L130

  3. XM_038567818.1 → XP_038423746.1  major facilitator superfamily domain-containing protein 12 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L130

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    55579634..55588060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005633234.2 → XP_005633291.2  major facilitator superfamily domain-containing protein 12 isoform X1

    UniProtKB/Swiss-Prot
    F1PZV2
    UniProtKB/TrEMBL
    A0A8C0QR18, A0A8I3NAR7, A0A8P0PIK8
    Conserved Domains (1) summary
    cd17491
    Location:22 → 467
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

  2. XM_038454934.1 → XP_038310862.1  major facilitator superfamily domain-containing protein 12 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L130
    Conserved Domains (1) summary
    cd17491
    Location:23 → 389
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12

  3. XM_038454935.1 → XP_038310863.1  major facilitator superfamily domain-containing protein 12 isoform X3

    UniProtKB/TrEMBL
    A0A8C0L130
    Conserved Domains (1) summary
    cd17491
    Location:16 → 383
    MFS_MFSD12; Major facilitator superfamily domain-containing protein 12
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F1PZV2.3 GenPept UniProtKB/Swiss-Prot:F1PZV2

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