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KRI1 KRRI-Interacting protein 1 [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4840983, updated on 21-Dec-2023

Summary

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Gene symbol
KRI1
Gene description
KRRI-Interacting protein 1
Locus tag
PICST_50166
Gene type
protein coding
RNA name
KRRI-Interacting protein 1
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See KRI1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_009048.1 (199301..201022)

Chromosome 8 - NC_009048.1Genomic Context describing neighboring genes Neighboring gene fungal transcriptional regulatory protein Neighboring gene hypothetical protein Neighboring gene Arylsulfatase (AS) (Aryl-sulfate sulphohydrolase) Neighboring gene aluminum resistance putative divalent cation transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009048.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
KRRI-Interacting protein 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009048.1 Reference assembly

    Range
    199301..201022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001386399.1 → XP_001386436.2  KRRI-Interacting protein 1 [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001386436.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LZV2
    Conserved Domains (2) summary
    pfam05178
    Location:312 → 387
    Kri1; KRI1-like family
    pfam12936
    Location:435 → 529
    Kri1_C; KRI1-like family C-terminal
Nucleotide Protein
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