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MAP9 microtubule associated protein 9 [ Canis lupus familiaris (dog) ]

Gene ID: 482662, updated on 17-Aug-2024

Summary

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Official Symbol
MAP9provided by VGNC
Official Full Name
microtubule associated protein 9provided by VGNC
Primary source
VGNC:VGNC:103691
See related
Ensembl:ENSCAFG00845010211
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See MAP9 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
23
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (53583032..53638052, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (53237017..53268511, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (53281735..53312411, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (52859592..52890139, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (52945281..53000278, complement)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111090108 Neighboring gene dnaJ homolog subfamily C member 21-like Neighboring gene ragulator complex protein LAMTOR3-like Neighboring gene guanylate cyclase 1 soluble subunit alpha 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Canine genome assembly correction facilitates identification of a MAP9 deletion as a potential age of onset modifier for RPGRIP1-associated canine retinal degeneration. Forman OP, et al. Mamm Genome, 2016 Jun. PMID 27017229
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. a MAP9 partial deficit is a particularly attractive candidate to synergise with a partial RPGRIP1 deficit to cause a more serious disease.
    Title: Canine genome assembly correction facilitates identification of a MAP9 deletion as a potential age of onset modifier for RPGRIP1-associated canine retinal degeneration.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in astral microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated protein 9; LOW QUALITY PROTEIN: microtubule-associated protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    53583032..53638052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038688698.1 → XP_038544626.1  microtubule-associated protein 9 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MN80, A0A8I3NFC0
    Conserved Domains (1) summary
    PTZ00121
    Location:411 → 878
    PTZ00121; MAEBL; Provisional

  2. XM_038688697.1 → XP_038544625.1  microtubule-associated protein 9 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MN80, A0A8I3NFC0
    Related
    ENSCAFP00845014008.1, ENSCAFT00845017981.1
    Conserved Domains (1) summary
    PTZ00121
    Location:411 → 878
    PTZ00121; MAEBL; Provisional

  3. XM_038688699.1 → XP_038544627.1  microtubule-associated protein 9 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MN80, A0A8I3NFC0
    Conserved Domains (1) summary
    PTZ00121
    Location:411 → 878
    PTZ00121; MAEBL; Provisional

  4. XM_038688700.1 → XP_038544628.1  microtubule-associated protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MQD5, A0A8I3N420, A0A8I3ND62
    Related
    ENSCAFP00845014216.1, ENSCAFT00845018227.1
    Conserved Domains (1) summary
    pfam10147
    Location:506 → 622
    CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    52859592..52890139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038496694.1 → XP_038352622.1  LOW QUALITY PROTEIN: microtubule-associated protein 9 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    52945281..53000278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038623026.1 → XP_038478954.1  microtubule-associated protein 9 isoform X1

  2. XM_038623024.1 → XP_038478952.1  microtubule-associated protein 9 isoform X1

  3. XM_038623027.1 → XP_038478955.1  microtubule-associated protein 9 isoform X1

  4. XM_038623028.1 → XP_038478956.1  microtubule-associated protein 9 isoform X2

    Conserved Domains (1) summary
    pfam10147
    Location:506 → 622
    CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    53281735..53312411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038559087.1 → XP_038415015.1  LOW QUALITY PROTEIN: microtubule-associated protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N420

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    53237017..53268511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022403539.2 → XP_022259247.2  microtubule-associated protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N420
    Conserved Domains (1) summary
    pfam10147
    Location:506 → 622
    CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

  2. XM_850247.6 → XP_855340.3  microtubule-associated protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N420
    Conserved Domains (1) summary
    pfam10147
    Location:506 → 622
    CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1

  3. XM_022403538.2 → XP_022259246.2  microtubule-associated protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N420
    Conserved Domains (1) summary
    pfam10147
    Location:506 → 622
    CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1
Nucleotide Protein
Heading Accession and Version

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