U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ASPRV1 aspartic peptidase retroviral like 1 [ Canis lupus familiaris (dog) ]

Gene ID: 481416, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
ASPRV1provided by VGNC
Official Full Name
aspartic peptidase retroviral like 1provided by VGNC
Primary source
VGNC:VGNC:108224
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ASPRV1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (69607664..69610843, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (68475773..68477269, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (69887596..69890775, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (69326977..69330111, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (69589052..69592139, complement)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein U4/U6.U5 subunit 27 Neighboring gene MAX dimerization protein 1 Neighboring gene uncharacterized LOC119873786 Neighboring gene uncharacterized LOC119873713

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A de novo variant in the ASPRV1 gene in a dog with ichthyosis. Bauer A, et al. PLoS Genet, 2017 Mar. PMID 28249031, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
retroviral-like aspartic protease 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    69607664..69610843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038678902.1 → XP_038534830.1  retroviral-like aspartic protease 1 isoform X1

    Conserved Domains (2) summary
    cd00303
    Location:238 → 330
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
    pfam00523
    Location:24 → 78
    Fusion_gly; Fusion glycoprotein F0

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    69326977..69330111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038489606.1 → XP_038345534.1  retroviral-like aspartic protease 1 isoform X2

    Conserved Domains (1) summary
    cd00303
    Location:228 → 320
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    69589052..69592139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038613539.1 → XP_038469467.1  retroviral-like aspartic protease 1 isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    69887596..69890775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038551592.1 → XP_038407520.1  retroviral-like aspartic protease 1 isoform X1

    Conserved Domains (2) summary
    cd00303
    Location:238 → 330
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
    pfam00523
    Location:24 → 78
    Fusion_gly; Fusion glycoprotein F0

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    68475773..68477269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014117456.2 → XP_013972931.2  retroviral-like aspartic protease 1 isoform X4

    UniProtKB/TrEMBL
    A0A8P0S932
    Conserved Domains (1) summary
    cd00303
    Location:165 → 257
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials