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PIGN phosphatidylinositol glycan anchor biosynthesis class N [ Canis lupus familiaris (dog) ]

Gene ID: 476182, updated on 17-Aug-2024

Summary

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Official Symbol
PIGNprovided by VGNC
Official Full Name
phosphatidylinositol glycan anchor biosynthesis class Nprovided by VGNC
Primary source
VGNC:VGNC:44538
See related
Ensembl:ENSCAFG00845000068
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PIGN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
33
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (14544736..14652948)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (15651440..15758632)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (14760723..14868433)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (14580565..14688156)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (14513807..14621155)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene U6 spliceosomal RNA Neighboring gene peptidylprolyl isomerase (cyclophilin A) pseudogene 1 Neighboring gene 60S ribosomal protein L29-like Neighboring gene uncharacterized LOC119870634 Neighboring gene ubiquitin-conjugating enzyme E2 C-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A homozygous PIGN missense mutation in Soft-Coated Wheaten Terriers with a canine paroxysmal dyskinesia. Kolicheski AL, et al. Neurogenetics, 2017 Jan. PMID 27891564, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 1
Names
phosphatidylinositol glycan, class N

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    14544736..14652948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038654008.1 → XP_038509936.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8I3MUL3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_038654007.1 → XP_038509935.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8I3MUL3
    Related
    ENSCAFP00845000099.1, ENSCAFT00845000134.1
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_038654010.1 → XP_038509938.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N651, A0A8I3RQM0
    Related
    ENSCAFP00845000113.1, ENSCAFT00845000148.1
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  4. XM_038654009.1 → XP_038509937.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8I3MUL3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    14580565..14688156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038465269.1 → XP_038321197.1  GPI ethanolamine phosphate transferase 1 isoform X1

  2. XM_038465268.1 → XP_038321196.1  GPI ethanolamine phosphate transferase 1 isoform X1

  3. XM_038465271.1 → XP_038321199.1  GPI ethanolamine phosphate transferase 1 isoform X2

  4. XM_038465270.1 → XP_038321198.1  GPI ethanolamine phosphate transferase 1 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    14513807..14621155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038590185.1 → XP_038446113.1  GPI ethanolamine phosphate transferase 1 isoform X1

    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_038590184.1 → XP_038446112.1  GPI ethanolamine phosphate transferase 1 isoform X1

    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_038590187.1 → XP_038446115.1  GPI ethanolamine phosphate transferase 1 isoform X2

    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  4. XM_038590186.1 → XP_038446114.1  GPI ethanolamine phosphate transferase 1 isoform X1

    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    14760723..14868433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038525874.1 → XP_038381802.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8I3MUL3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_038525873.1 → XP_038381801.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8I3MUL3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_038525876.1 → XP_038381804.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N651, A0A8I3RQM0
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  4. XM_038525875.1 → XP_038381803.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8I3MUL3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15651440..15758632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022415750.1 → XP_022271458.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8P0N3B3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_005615354.2 → XP_005615411.1  GPI ethanolamine phosphate transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_005615411.1

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8P0N3B3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_005615357.2 → XP_005615414.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N651, A0A8P0P796
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  4. XM_533387.5 → XP_533387.4  GPI ethanolamine phosphate transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_533387.4

    UniProtKB/TrEMBL
    A0A8C0MZB8, A0A8P0N3B3
    Conserved Domains (2) summary
    cd16020
    Location:43 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 901
    PigN; Phosphatidylinositolglycan class N (PIG-N)
Nucleotide Protein
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