FBXO45 F-box protein 45 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: FBXO45provided by VGNC
Official Full Name: F-box protein 45provided by VGNC
Primary source: VGNC:VGNC:1817
Locus tag: CK820_G0045895
See related: Ensembl:ENSPTRG00000015783
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	2	NC_086015.1 (199717677..199736002)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	3	NC_072401.1 (199627056..199645381)

Chromosome 2 - NC_086015.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

L18506 (e-PCR)
- UniSTS:54024

SHGC-77696 (e-PCR)
- UniSTS:11531

RH80690 (e-PCR)
- UniSTS:85804

D8S2279 (e-PCR)
- UniSTS:473907

RH102770 (e-PCR)
- UniSTS:97104

SHGC-77694 (e-PCR)
- UniSTS:76890

L17796 (e-PCR)
- UniSTS:12896

D7S3207 (e-PCR)
- UniSTS:229489

D1S1423 (e-PCR)
- UniSTS:149619

D3S4124 (e-PCR)
- UniSTS:81022

D3S3440 (e-PCR)
- UniSTS:24706

NIB2025 (e-PCR)
- UniSTS:26761

RH66305 (e-PCR)
- UniSTS:11914

D16S325 (e-PCR)
- UniSTS:147089

WI-22352 (e-PCR)
- UniSTS:79795

GDB:335751 (e-PCR)
- UniSTS:156601

G38229 (e-PCR)
- UniSTS:46069

SHGC-77693 (e-PCR)
- UniSTS:70398

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in synapse assembly involved in innervation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of SCF ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in synapse	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: F-box/SPRY domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

199717677..199736002

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016940210.3 → XP_016795699.1 F-box/SPRY domain-containing protein 1

UniProtKB/TrEMBL

A0A2J8JN62, A0A6D2X8Q1, H2QP11

Related

ENSPTRP00000027160.3

Conserved Domains (2) summary

cd12907
Location:112 → 286

SPRY_Fbox; SPRY domain in the F-box family Fbxo45

pfam12937
Location:38 → 83

F-box-like