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CIMG_06010 ribosome biogenesis GTPase Lsg1 [ Coccidioides immitis RS ]

Gene ID: 4561924, updated on 31-Oct-2024

Summary

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Gene symbol
CIMG_06010
Gene description
ribosome biogenesis GTPase Lsg1
Locus tag
CIMG_06010
See related
FungiDB:CIMG_06010; VEuPathDB:CIMG_06010
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Coccidioides immitis RS (strain: RS)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides
Orthologs
Aspergillus fumigatus all
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Genomic context

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See CIMG_06010 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_004504309.1Genomic Context describing neighboring genes Neighboring gene filamentation protein Neighboring gene NADH-ubiquinone oxidoreductase subunit Neighboring gene CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene low-temperature viability protein ltv1 Neighboring gene C2H2 type zinc finger domain-containing protein Neighboring gene C2H2 transcription factor Neighboring gene STE/STE11 protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004504309.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis GTPase Lsg1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004504309.1 Reference assembly

    Range
    1466258..1468533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001242113.2 → XP_001242114.1  ribosome biogenesis GTPase Lsg1 [Coccidioides immitis RS]

    See identical proteins and their annotated locations for XP_001242114.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J8TR39, J3K784
    Conserved Domains (3) summary
    PRK03003
    Location:297 → 388
    PRK03003; GTP-binding protein Der; Reviewed
    cd01857
    Location:177 → 410
    HSR1_MMR1; A circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:162 → 519
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials