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CIMG_09183 dynein heavy chain, cytoplasmic [ Coccidioides immitis RS ]

Gene ID: 4558410, updated on 31-Oct-2024

Summary

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Gene symbol
CIMG_09183
Gene description
dynein heavy chain, cytoplasmic
Locus tag
CIMG_09183
See related
FungiDB:CIMG_09183; VEuPathDB:CIMG_09183
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Coccidioides immitis RS (strain: RS)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides
Orthologs
Aspergillus fumigatus all
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Genomic context

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See CIMG_09183 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_004504307.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein;uncharacterized protein Neighboring gene TOR signaling pathway regulator Neighboring gene dicer-like protein 1 Neighboring gene uncharacterized protein Neighboring gene acetyltransferase Neighboring gene uncharacterized protein Neighboring gene histone H4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004504307.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables minus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein heavy chain, cytoplasmic

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004504307.1 Reference assembly

    Range
    2196504..2210271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001239561.2 → XP_001239562.1  dynein heavy chain, cytoplasmic [Coccidioides immitis RS]

    See identical proteins and their annotated locations for XP_001239562.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J7BF48, J3K1T0
    Conserved Domains (7) summary
    COG5245
    Location:1082 → 4309
    DYN1; Dynein, heavy chain [Cytoskeleton]
    pfam03028
    Location:3927 → 4325
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08385
    Location:262 → 841
    DHC_N1; Dynein heavy chain, N-terminal region 1
    pfam08393
    Location:1354 → 1754
    DHC_N2; Dynein heavy chain, N-terminal region 2
    pfam12777
    Location:3199 → 3529
    MT; Microtubule-binding stalk of dynein motor
    pfam12781
    Location:3561 → 3775
    AAA_9; ATP-binding dynein motor region D5
    cl21455
    Location:1895 → 2126
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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