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rhoj.L ras homolog family member J L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444554, updated on 4-Nov-2024

Summary

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Official Symbol
rhoj.L
Official Full Name
ras homolog family member J L homeolog
Primary source
Xenbase:XB-GENE-957542
Locus tag
XELAEV_18039787mg
See related
EnsemblRapid:ENSXLAG00005030388 AllianceGenome:Xenbase:XB-GENE-957542
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
arhj; rhoj; tc10b; rasl7b
Summary
Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Predicted to act upstream of or within Cdc42 protein signal transduction; endocytosis; and establishment or maintenance of cell polarity. Orthologous to human RHOJ (ras homolog family member J). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See rhoj.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (92767776..92817938, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (78041705..78091869, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit B', epsilon L homeolog Neighboring gene glycoprotein hormone beta 5 L homeolog Neighboring gene potassium voltage-gated channel subfamily H member 5 L homeolog Neighboring gene uncharacterized LOC108698821 Neighboring gene uncharacterized LOC108698822

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83410

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within Cdc42 protein signal transduction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within endocytosis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ras homolog family member J L homeolog
Names
ras homolog gene family, member J

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092656.1 → NP_001086125.1  ras homolog family member J L homeolog

    See identical proteins and their annotated locations for NP_001086125.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074226
    UniProtKB/TrEMBL
    A0A974C879, Q6GM57
    Related
    ENSXLAP00005090785.1, ENSXLAT00005092465.1
    Conserved Domains (2) summary
    smart00174
    Location:24 → 197
    RHO; Rho (Ras homology) subfamily of Ras-like small GTPases
    cd04135
    Location:22 → 195
    Tc10; Rho GTPase TC10 (Tc10)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    92767776..92817938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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