dctn5 dynactin 5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: dctn5provided by ZNC
Official Full Name: dynactin 5provided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-201
See related: Ensembl:ENSDARG00000003573 AllianceGenome:ZFIN:ZDB-GENE-040718-201
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:92842
Summary: Predicted to be part of dynactin complex. Orthologous to human DCTN5 (dynactin subunit 5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (35550870..35554801, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (35421362..35425293, complement)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
part_of dynactin complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: dynactin subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001002497.1 → NP_001002497.1 dynactin subunit 5

See identical proteins and their annotated locations for NP_001002497.1

Status: PROVISIONAL

Source sequence(s)

BC076304

UniProtKB/TrEMBL

Q6DGN7

Related

ENSDARP00000002605.6, ENSDART00000010944.7

Conserved Domains (1) summary

cd03359
Location:13 → 173

LbH_Dynactin_5; Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport. Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping ...