bpnt1 bisphosphate nucleotidase 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: bpnt1provided by ZNC
Official Full Name: bisphosphate nucleotidase 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-46
See related: Ensembl:ENSDARG00000043684 AllianceGenome:ZFIN:ZDB-GENE-040718-46
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:92144
Summary: Predicted to enable 3'(2'),5'-bisphosphate nucleotidase activity. Predicted to act upstream of or within phosphatidylinositol phosphate biosynthetic process. Is expressed in intestinal bulb. Orthologous to human BPNT1 (3'(2'), 5'-bisphosphate nucleotidase 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (9128881..9149015)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (9141150..9160578)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables 3'(2'),5'-bisphosphate nucleotidase activity	IBA Inferred from Biological aspect of Ancestor more info
enables 3'(2'),5'-bisphosphate nucleotidase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables inositol-1,4-bisphosphate 1-phosphatase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within phosphatidylinositol phosphate biosynthetic process	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: 3'(2'),5'-bisphosphate nucleotidase 1

NP_001002354.1

EC 3.1.3.7

XP_021324071.1

EC 3.1.3.7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001002354.1 → NP_001002354.1 3'(2'),5'-bisphosphate nucleotidase 1

See identical proteins and their annotated locations for NP_001002354.1

Status: PROVISIONAL

Source sequence(s)

BC075903

UniProtKB/TrEMBL

Q6DHR4

Related

ENSDARP00000064143.3, ENSDART00000064144.5

Conserved Domains (1) summary

cd01640
Location:11 → 297

IPPase; IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate. Members in this group may ...

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007131.7 Reference GRCz11 Primary Assembly

Range

9128881..9149015

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021468396.2 → XP_021324071.1 3'(2'),5'-bisphosphate nucleotidase 1 isoform X1

UniProtKB/TrEMBL

A0A0R4IHR0, A0A8M9PP86

Related

ENSDARP00000133628.1, ENSDART00000163883.2

Conserved Domains (1) summary

cd01640
Location:11 → 319

IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate. Members in this group may also ...